Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLEQKLDHLVSQILLKAENQHELLFGTCQS--DVKLTNTQEHILMLLSQE-QLTNSDLAKKLNISQAAVTKAVKSLISQDMLKANKDSKDARITYFELSELAKPIADEHTHHHDNTLGVYGRLVNHFSKDEKVVLERFLDLFSRELEG
3ECH Chain:A ((8-141))
----------DLMPALMAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQMC---ALITRKIRELEGRNLVRR----------QLFLTDEGLAIHLHAELIMS---RVHDELFAPLTPVEQATLVHLLDQCLAAQ--
General information:
TITO was launched using:
RESULT:
Template:
3ECH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56816 for 703 contacts (-80.8/contact) +
2D Compatibility (PS) -12234 + (NN) -4323 + (LL) 2152
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -78621.0 ( -111.84 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_3ECH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ECH-query.scw
PDB file :
Tito_Scwrl_3ECH.pdb
: