Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKVRYGVVSTAKVAPR-FIEGV-RLAGNGEVVAVSSRTLESAQAFAN-KYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLASGEIGEVIS-ISSTTAY-PN---IDHVTWFRELELGGGTVHFMAPYALSY-LQYLFDATITHASGTATFPKGQS-DSQSKLLLQLSNGVLVDIFLTTRLNLPHEMIIYGTEGRLIIPHFWKTTHAKLVRNDTSARTI-QVDMVSDFEKEAYHVSQMILEGQRVSHIMTPQLTLSGVKIIEDLYRSWGK-------- |
| 1ZH8 Chain:A ((16-340)) | LRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNP-AVFDSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELVESGAIGDPVFMNWQIWVGMDENNKYVHTDWRKKPKHVGGFLSDGGVHHAAAMRLILGEIEWISAVAKDLSPLLGGMD-FLSSIFEFENGTVGNYTISYSLKGNERFEITGTKGKISISW----------DKIVLNEEEMKVPQENSYQKEFEDFYQVVAEGKPNDLG-SPVQALKDLAFIEACVRSAGNKVFVSSLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184384 for 2570 contacts (-71.7/contact) +
2D Compatibility (PS) -33079 + (NN) -9722 + (LL) 1116
1D Compatibility (HY) -5200 + (ID) 3300
Total energy: -234569.0 ( -91.27 by residue)
QMean score : 0.438
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