Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKERVDVLAYKQGLFDTREQAKRGVMAGMVINVINGERYDKPGEKVADDTELKLKGEKLKYVSRGGLKLEKALQVFEISVADKLTIDIGASTGGFTDVMLQSGARLVYAVDVGTNQLVWKLRQDHRVRSMEQYNFRYAQKED---FKEGLPEFASIDVSFISL---NLILPALKEILVDGGQVVALIKPQ--FEAGREQIG----KNGIV---KDKLVHEKVLTTVTNFTKDYGYTVKHLDFSPIQGGH--GNIEFLMHLQK--CQDPQNLVLDQIQDVIEKAHKEFKKNEEE |
| 3CCF Chain:A ((56-257)) | --------------------------------------------------------------------------------QPGEFILDLGCGTGQLTEKIAQSG-AEVLGTDNAATMIEKA-RQNYP-------HLHFDVADARNFRVDKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTYAALFNRPTTLAEGEFGMANWIQMFASAFLVGLTPDQQVQLIRKVEATLQDKLYH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CCF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29146 for 1228 contacts (-23.7/contact) +
2D Compatibility (PS) -19717 + (NN) -5242 + (LL) 7080
1D Compatibility (HY) -1600 + (ID) 1500
Total energy: -50125.0 ( -40.82 by residue)
QMean score : 0.327
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