Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSKKLLFSAAVLTMVAGSTVEPVAQFATGMSIVRAAEVSQERPAKTTVNIYKLQADSYKSEITSNGGIENKDGEVISNYAKLGDNVKGLQGVQFKRYKVKTDISVDELKKLTTVEAADAKVGTILEEGVSLPQKTNAQGLVVDALDSKSNV-RYLYVEDLKNSPSNITKAYAVPFVLELPVANSTGTGFLSEINIYPKNVVTDEPKTDKDVKKLGQ-DDAGYTIGEEFKW-FLKSTIPANLGDY---EKFEITDKFADGLTYKSVGKIKIGSKTLNRDEHYTIDEPTVDNQNTLKITFKPEKFKEIAELLKGMTLVKNQDALDKA--TANT-DDAAFLEIPVASTINEKAVLGKAIENTFELQYDHTPDKADNPKPSNPPRKPEVHTGGKRFVKKDSTETQTL-GGAEFDLLASDGTAVKWTDALIKANTNKNYIAGEAVTGQPIKLKSHTDGTFEIKGLAYAVDANAEGTAVTYKLKETKAPEGYVIPDKEIEFTVSQTSYNTKPTDITVDSADATPDTIKNNKRPSIPNTGGIGTAIFVAIGAAVMAFAVKGMKRRTKDN |
| 3KPT Chain:A ((6-355)) | -----------------------------------------------------------------------------------------------------------------------------------------KRGAVDLIKTGVNEKAMAGAVFSLFKKDGTEVKKELATDANGHIRVQGLEYGEYYFQETKAPKGYVIDPTKREFFVKNSGTINEDGTITSGTVVKMEVKNNEEPTIDKKINGKLEALPINPLTNYNYDIKTLIPEDIKEYKKYVVTDTLDNRLVIQGKPIVKIDGAEVNA-----NVVEVAIEGQKVTATVKDFTKMDGKKEFHLQIKSQVKEGVPSGSEILNTAKIHFTNKNDV--IGEKESKPVVVIPTTGIIELTKIDS-ANKNKMKGAEFVLKDNNGKIVV-------------------VAGKEVTGVSDENGVIKWSNIPYG----------DYQIFETKAPTYTKEDGTKTSYQLLKD-----PIDVKISENNQTVKLTIENNKS----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 45930 for 2470 contacts (18.6/contact) +
2D Compatibility (PS) -34872 + (NN) 6787 + (LL) 15000
1D Compatibility (HY) -4400 + (ID) 2700
Total energy: 25745.0 ( 10.42 by residue)
QMean score : 0.257
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