Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTLKLMFSFLLMLGTMFGISQTVLAQE--THQLTIVHLEARDIDRPNPQLEIAPKEGTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITEL--KKQAQQVFEATTNQ---------QGKATFNQLPDGIYYGLAVKAGEKNRNVSAFLVDLSEDKVIYPKIIWSTGELDLLKVG--VDGDTKKPLAGVVFELYEKNGRTPIRVKNGVHSQDIDAAKHLETDSSGHIRISGLIHG--DYVLKEIETQSG---YQIGQAETAVTIEKS---------KTVTVTIENKKVPTPKVPSRGGLIPKTG-EQQAMALV-------IIGGILIALALRLLSKHRKHQNKD---------------------- |
| 3ZPJ Chain:A ((1-356)) | --MTTLEEINLLVERGYYEEALAKVYEIEDPIEQVQVLTKIVVTIYQHDGPMEWIPS---IMEDAMYIAKKLRDPANKAVAYSIIASTLAIMEYEEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAGYPDNALEIFNIAFDTIIGAETSYTHKVDGILRIGDL-LEKAGDTLPSNEAMDFYKMAFDIFDKLH---VNQRAAIVEKKIELAKTVYDVGLPQIR-AALLKGKNHYALAIIKKKYSGVMRLIGELEVALWMKRVNNMEYLDVVDKAFECCESPRFTDVNVQHIARLLTELGNLRRALKFAKEIQNIHKRSEALKAIALELVRRKKFEEVKKIIESIPDPKIREEALNEIGTIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39152 for 2248 contacts (-17.4/contact) +
2D Compatibility (PS) -30928 + (NN) -6117 + (LL) 396
1D Compatibility (HY) -9600 + (ID) 2600
Total energy: -88001.0 ( -39.15 by residue)
QMean score : 0.237
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