Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTKKEFILGLTIIITLTLLIMLIFLVMFNKSSNSKLKQTKDRRVLSTSTTRTSSSSHDQKIVEKSLEKKKMVMEQDMELMNAYRLYYDYAHLSLKEVVLAYMSEYGIEKNSVAFSYKNLKTGQRDAMNDTQAMTAGSTYKLPLNMLVVDAVVKGKLSMEERFDITETDYEYIGEHNNYVAAFSGAMSIDDMQKYSLVYSENTPAYALAER--IGGMDSAYSKFG-------RYGQSKGDIKNIQKNGNKVTTDYYIQVLDYLWKHRKKYDSLITYLEEAFPTDY---------YRALIPSDVVVAQKPGYVREALNVGAIVKEE--VPYIVAIYTAGLGGSTQEDSEINGVGLYQLEQLCFVINQWHRVNMN |
| 2WUQ Chain:A ((3-316)) | -------------------------------------------------------------------------------------------NSESLLRELRDALHEGGLT---GSFLVRDLYTGEELGIDPDTELPTASLVKLPLALATLERIRLGEVDGAQQIEVAPGRITTPGPTGLSRFRHPARVAVDDLLYLSTSVSDGTASDALFEITPPAQVEQMVREWGFRDLTVRHSMREHRVPQLDVARANTGTARAFVDLLEALWAPVLTGPALPPEPAARLRELMAANLLRHRLAPDFASDAATWSSKTGTLLNLRHEVGVVEHADGQVFAVAVLTES-QVPADSQPGAEALMAQVARRLRDRLREWHHHH-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77823 for 2124 contacts (-36.6/contact) +
2D Compatibility (PS) -26861 + (NN) -979 + (LL) 8616
1D Compatibility (HY) -1600 + (ID) 1950
Total energy: -100597.0 ( -47.36 by residue)
QMean score : 0.384
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