Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTRSKLAAGFLTLMSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVKTSKAAQQSMLTLILSRVFDTQYGDKVSDKKVSEAYNKTAKGYGNSFSSALSQAGLTPEGYKQQIRTTMLVEYAVKEAAKKELTEANYKEAYKNYTPETSVQVIKLDAEDKAKSVLKDV-----KADGADFAKIAKEKTTATDKKVEYKFDSAGT----SLPKEVMSAAFKLDKNGVSDVVSTVDSTTYKTSYYIIKVTDKTEKK-SDWKSYKNRLKEVILKDKTSDRSFQNKVISKALEKANVKIKDKAFAGILSQYATTSGSSSLKK |
| 3RFW Chain:A ((22-273)) | ------------------------------ATVATVNGKSISDTEVSEFFAPMLRGQDFKTL---PDNQKKALIQQYIMQDLILQDAKK-QNLEKDPLYTKELDRAKDAILVNVYQEKILNTIKIDAAKVKAFYDQNKDKYVKP--ARVQAKHILVATEKEAKDIINELKGLKGKELDAKFSELAKEKSI--DPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITT-----TPVKTNFGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEYK------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18843 for 1461 contacts (12.9/contact) +
2D Compatibility (PS) -25448 + (NN) -1333 + (LL) 4988
1D Compatibility (HY) -3600 + (ID) 1800
Total energy: -8350.0 ( -5.72 by residue)
QMean score : 0.420
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