Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQVEVDLPNHSYHIKIEEGCFS--EAGDWVSHLWQKQMITIITDSNVEILYGESLVNQLKKQGFTV------HVFSFAAGEASKTLEVANRIYGFLAKHH--MTRSDGIIALGGGVVGDLAAFVASTYMRGIHFLQIPTSLTAQVDSSIGGKTGVNTSFAKNMVGTFAQPDGVLIDPVTLKTLGNRELVEGMGEVIKYGLIDDIKLWHILEEMDGTI-DSIL--------------DSALAIIYHSCQVKRKHVLADQYDKGLRMHLNFGHTIGHAIEVHAGYGEIMHGEAVAIGMIQLSRVAERKNLMPRGISQDIYNMCLKFGLPVHYAEW-----------DKDVLFDILSHDKKASGQFIKIVILPQLGSATVH---QIPLEEMRDYLEK |
| 1SG6 Chain:A ((9-392)) | -------ILGRESIIADFGLWRNYVAKDLISDC-SSTTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRREVTPGEHRFEGTEEILKARILASARHKAYVVSA-----GLRNLLNWGHSIGHAIEAILT-PQILHGECVAIGMVKEAELARHLGILKGVAVSRIVKCLAAYGLPTSLKDARIRKLTAGKHCSVDQLMFNMALDKK-------IVLLSAIGTPYETRASVVANEDIRVVLA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227615 for 2872 contacts (-79.3/contact) +
2D Compatibility (PS) -35392 + (NN) -11949 + (LL) 1816
1D Compatibility (HY) -24000 + (ID) 6000
Total energy: -303140.0 ( -105.55 by residue)
QMean score : 0.465
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