Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIIYLGLACVSILTLSGCESIERSLKGDRYVDQKLAENSSKEATEQLNKKTKQALKADKKAFPQLDKAVAKNEAQVLIKTSKGDINIKLFPKYAPLAVENF--LTHAKEGY-YNGLSFHRVIKDFMIQSGD-PNGDGTGGKSIWNSKDKKKDSGNGFVNEISPYLYNIRGSLAMANAGADTNGSQFFINQSQQDHSKQLSDKKVPKVIIKAYSEGGNPSLDGGYTVFGQVISGMETVDKIASVEVTKSDQPKEKITITSIKVIKDYKFK |
3RDB Chain:A ((19-160)) | ------------------------------------------------------------------------------------GRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDE---NFTLKHVGP------GVLSMANAGPNTNGSQFFICTIKTDW------------------------LDGKHVVFGHVIEGMDVVKKIESFG-SKSGRTSKKIVITDCGQLS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RDB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20786 for 1035 contacts (-20.1/contact) +
2D Compatibility (PS) -14773 + (NN) -7712 + (LL) 8668
1D Compatibility (HY) -11200 + (ID) 3350
Total energy: -49153.0 ( -47.49 by residue)
QMean score : 0.518
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