Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLTEIKKSPEGLYFDKKIDI---KESLMERHSEIMDISDIQVSGHVVYED----------------GLYLL-DYNMAYD------------------ITLPSSRSMKPVVLSEKQTIN--EVFIEAENVSTKKELVDQDLVLILEEDDINLEESVIDNILLNIPLRV---LAADEVGVEADLSGKNWSLMTEKQYEEKQAKEKEKSNPFAALEGMFDSD |
1AER Chain:A ((1-211)) | ----AFLGDGGDVSFSTRGTQNWTVERLLQAHRQLEERGYVFVGYHGTFLEAAQSIVFGGVRAAIWRGFYIAGDPALAYGYAQDQEPDARGRIRNGALLRVYVPRSSLPGFYRTSLTLAAPEAAGEVERLIGHPLPLRLDAITGPEEEG-GRLETILGWPLAERTVVIPSAIPTDPRNVGGDLDPSSIPDKEQAISALPDYASQPGKPPR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2158 for 1109 contacts (1.9/contact) +
2D Compatibility (PS) -16962 + (NN) -3216 + (LL) 1372
1D Compatibility (HY) -1200 + (ID) 1400
Total energy: -19248.0 ( -17.36 by residue)
QMean score : 0.158
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