Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLLELVNLHKTFEKGTVNENHVLRGLDLTIEDGDFISVIGGNGAGKSTLLNCIAGLIPIDQGAITLDNQSITKDSVEKR----SKDISRVFQDPRMGTATNLTIEENMAIAHKRGNKRHIFRQSVTDDDRQLFKKSLSQLGLGLENRMKTDAAFLSGGQRQALTLAMATLVRPKLLLLDEHTAALDPKTSDMVMELTQKVIEEQRLTALMITHNMEHAIAYGNRLVMLYHGKIVVDVKGEAKRNLTVAELMELFHKNSGQQLIDDALVLG
2PCJ Chain:A ((2-222))AEILRAENIKKVIRG-----YEILKGISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEGKEVDYTNEKELSLLRNRKLGFVFQFHYL--IPELTALENVIVPMLKMGKP-------KKEAKERGEYLLSELGL--GDKLSRKPYELSGGEQQRVAIARALANEPILLFADEPTGNLDSANTKRVMDIFLKIN-EGGTSIVMVTHEREL-AELTHRTLEMKDGKVVGEITRV------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119023 for 1736 contacts (-68.6/contact) +
2D Compatibility (PS) -23455 + (NN) -6841 + (LL) 3424
1D Compatibility (HY) -11600 + (ID) 3050
Total energy: -160545.0 ( -92.48 by residue)
QMean score : 0.570

(partial model without unconserved sides chains):
PDB file : Tito_2PCJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PCJ-query.scw
PDB file : Tito_Scwrl_2PCJ.pdb: