Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLLELVNLHKTFEKGTVNENHVLRGLDLTIEDGDFISVIGGNGAGKSTLLNCIAGLIPIDQGAITLDNQSITKDSVEKR----SKDISRVFQDPRMGTATNLTIEENMAIAHKRGNKRHIFRQSVTDDDRQLFKKSLSQLGLGLENRMKTDAAFLSGGQRQALTLAMATLVRPKLLLLDEHTAALDPKTSDMVMELTQKVIEEQRLTALMITHNMEHAIAYGNRLVMLYHGKIVVDVKGEAKRNLTVAELMELFHKNSGQQLIDDALVLG |
2PCJ Chain:A ((2-222)) | AEILRAENIKKVIRG-----YEILKGISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEGKEVDYTNEKELSLLRNRKLGFVFQFHYL--IPELTALENVIVPMLKMGKP-------KKEAKERGEYLLSELGL--GDKLSRKPYELSGGEQQRVAIARALANEPILLFADEPTGNLDSANTKRVMDIFLKIN-EGGTSIVMVTHEREL-AELTHRTLEMKDGKVVGEITRV------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119023 for 1736 contacts (-68.6/contact) +
2D Compatibility (PS) -23455 + (NN) -6841 + (LL) 3424
1D Compatibility (HY) -11600 + (ID) 3050
Total energy: -160545.0 ( -92.48 by residue)
QMean score : 0.570
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