Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQGTVKWFNSEKGFGFISSETGTDVFAHFSEIKVDGFKTLEEGQKVTFDIQDGQRGPQATNINLVK
1C9O Chain:A ((1-66))
MQRGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAANVVKL-
General information:
TITO was launched using:
RESULT:
Template:
1C9O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27599 for 433 contacts (-63.7/contact) +
2D Compatibility (PS) -6743 + (NN) -359 + (LL) 64
1D Compatibility (HY) -6400 + (ID) 2000
Total energy: -43037.0 ( -99.39 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_1C9O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C9O-query.scw
PDB file :
Tito_Scwrl_1C9O.pdb
: