Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MEMMIKKRIKQVKKGDQDAFADIVDIYKDKIYQLCYRMLGNVHEAEDIAQEAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYSQIVADGVLPEDAVVSLELSNTIQQKILKLPDKYRTVIVLKYIDELSLIEIGEILNIPVGTVKTRIHRGREALRKQLRDL
1OR7 Chain:A ((-1-187))
HMSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVP-SGDVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAE--------NFESGGANLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQP-
General information:
TITO was launched using:
RESULT:
Template:
1OR7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81539 for 1110 contacts (-73.5/contact) +
2D Compatibility (PS) -19077 + (NN) -9668 + (LL) 1112
1D Compatibility (HY) -8800 + (ID) 2950
Total energy: -120922.0 ( -108.94 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_1OR7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OR7-query.scw
PDB file :
Tito_Scwrl_1OR7.pdb
: