Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRFFIADDDRAVRSILRQIIEDEDLGEAAGEADDGSQVEGHMLQFKQIDILLIDLLMPGRDGIETIRQIQNTYSGKIVMISQVEAKEMVGEAYSLGIEYFIHKPINRIEIVTVLQKVKERIELEHSIGAIQHSLSRLVNRTERKARPQQKSDSGLKEAGTFLLSELGMMGEGG----AHDLMAVLQYLAEHEQSEPHEKQSPSLKQIFTQVAVRKLGTGASQTEVNREMKASEQRIRRAIIHSLHHFASLGTTDFSNPKFETYASKFFDFPVVSQKMKELQSKDAKPLAPARINMKKFIHVFFLEAKLLHETMKQRRI
2GWR Chain:A ((7-207))-RILVVDDDASLAEMLTIVLRGE--GFDTAVIGDGTQALTAVR-ELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRNDDEPAEMLSIADV-EIDVPA-HKVT-RNGEQISLTPLEFDLLVAL--ARKPRQVFTRDVLLEQVWG-YR----ADTRLVNVHVQRLRAKVEK---------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2GWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 918 -110681 -120.57 -567.59
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -120.57
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.372

(partial model without unconserved sides chains):
PDB file : Tito_2GWR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GWR-query.scw
PDB file : Tito_Scwrl_2GWR.pdb: