Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKVMLATALFLGLTPAGANAADLGHQTLGSNDGWGAYS-----TGTTGGSKASSSNVYTVSNRNQLVSALGKETNTTPKIIYIKGTIDMNVDDNLKPLGLNDYKDPEYDLDKYLKAYDPSTWGKKEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVVGGNFQIK-SDNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTS--DDGKLKITLHHNRYKNIVQRAPRVRFGQVHVYNNYYEGSTSSSS---YPFSYAWGIGKSSKIYAQNNVIDVPGLSA-AK--T--I-SVFS-GGTALYDS----GTLLNGTQINASAANGLSSSVGWT--PSLHGSIDASANVKSNVINQAGAGKLN
3ZSC Chain:A ((4-332))-----------------------------DKPVGFASVPTADLPEGTVGGLGGE---IVFVRTAEELEKYTTAE---GKYVIVVDGTIVFEPK-----------------------------------------------------REIKVLSDKTIVGIN-DAKIVGGGLVIKDAQNVIIRNIHFEGFYMED---DP-----RGKKYDFDYINVENSHHIWIDHITFVNG-----------------NDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIRFGMAHVFNNFYSMGLRTGVSGNVFPIYGVASAMGAKVHVEGNYFMGYGAVMAEAGIAFLPTRIMGPVEGYLTLGEGDAKNEFYYCKEPEV-RPVEEGKPALDPREYYDYTLDPVQDVPKIVVDGAGAGKLV


General information:
TITO was launched using:
RESULT:

Template: 3ZSC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2078 -120117 -57.80 -393.83
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -57.80
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.528

(partial model without unconserved sides chains):
PDB file : Tito_3ZSC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZSC-query.scw
PDB file : Tito_Scwrl_3ZSC.pdb: