Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQMNRYDQAATLRAKMEKRERVLPMVYSQKAKTLAVISGKGGVGKSNITLNMALALQDKGKKVLLIDLDIGMGNIDILIGNSSSATIIDVLTDRKPLLQSLSVGPKGLRYISGGTGLDVMFQLDQRKWTFFANELSHALSQFDYVLFDMGAGLSKDQLPFILSAEDILIITTPEPTAIMDAYSAVKHLVLTENKLSMKVAVNRCRDQKEGLDAFARLSRTIHMFLDVQVQFAGSVSDDVIVSKAVVEQVPFFIKSPQAKASRSVRILADALFEREETRHKEDKQTFIEKLSSFLMRRA
4RZ3 Chain:A ((29-272))-----------------------------SPRTIAVTSGKGGVGKSNVSLNFSLSLSKLGFRVLLLDMAIGMGNIDILLGESSSLALADWFSARLPLSELVKSGPEHLSYIAGGTGAAQWQGLDTASIDRFLTELQAVASQYDYLIFDMGAGASGERLYFLKSVDDVFVVTTPEPTAMTDAYAMMKYMHAAGSEAPFSVIVNRAGKEREGYEVFERLKHVTGRFLNKDIALLGIIPEDRTVARAVVSQTPFVLLDPAAKASKAVRQMAFRYAP-------------------------


General information:
TITO was launched using:
RESULT:

Template: 4RZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1369 -172177 -125.77 -705.64
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -125.77
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_4RZ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RZ3-query.scw
PDB file : Tito_Scwrl_4RZ3.pdb: