Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNTIETILNHRSIRSFTDQLLTAEEIDTLVKSAQAASTSSYVQAYSIIGVSDPEKKRELSVLAGNQPYVEKNGHFFVFCADLYRHQQLAEEKGEH----------------ISEL-----LENTEMFMVSLIDAALAAQNMSIAAESMGLGICYIGGIRNELDKVTEVLQTPD-HVLPLFGLAVGHPANLS----GKKPRLPKQAVYHENTYNVNTDDFRHTMNTYDKTISDYYRERTNGKREETWSDQILNFMKQKPRTYLNDYVKEKGFNKN
3OF4 Chain:A ((2-208))-MYLEKLQQWRYATADFSGAHITDDVLDKLLNTTRLTASSYGLQPYCTLVIRNKGLREQLVNHSFGQQKVADSSALVIFAAKTGAVADIVDPYISELSQQRQLTNEEAENTRNYFTQKLQAMSAATRKEWAVRQAYIGLGTFLLAAAELEVDSCPMEGI--EHDAYDNILSLKDLGLSTVFACPVGYRSEADTTQFQKKVRQPLSRFKVV-----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3OF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 778 -45803 -58.87 -253.06
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -58.87
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.581

(partial model without unconserved sides chains):
PDB file : Tito_3OF4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OF4-query.scw
PDB file : Tito_Scwrl_3OF4.pdb: