Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRIVQFGVSAVAAAAIGIGAGSGIAAAFDGEDEVTGPDADRARAAAV-QAVPGGTAGEVETETGEGAAAYGVLVTRPDGTRVEVHLDRDFRVLDTEPADGDGG
3DB7 Chain:A ((77-126))
---------------------------------------IPAAIQKYVTTNYPDAKVLKIERDK----KDYEVKLSN--R--TELKFDLKFNLIDID-------
General information:
TITO was launched using:
RESULT:
Template:
3DB7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17585 for 296 contacts (-59.4/contact) +
2D Compatibility (PS) -5539 + (NN) -5323 + (LL) 1300
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -31247.0 ( -105.56 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_3DB7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DB7-query.scw
PDB file :
Tito_Scwrl_3DB7.pdb
: