Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFRAPGCAPCDRVRRGVGDVCADLG-DVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTSGVPKAADLRSALKPLLA
3TCO Chain:A ((20-108))
--------------------------------------------------NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTTLIF-VNGQLVDSLVGAVDEDTLESTVNKYL-
General information:
TITO was launched using:
RESULT:
Template:
3TCO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50645 for 616 contacts (-82.2/contact) +
2D Compatibility (PS) -9684 + (NN) -2807 + (LL) 4580
1D Compatibility (HY) -7200 + (ID) 1250
Total energy: -67006.0 ( -108.78 by residue)
QMean score : 0.795
(partial model without unconserved sides chains):
PDB file :
Tito_3TCO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TCO-query.scw
PDB file :
Tito_Scwrl_3TCO.pdb
: