Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRMGDASLTTELGRVLVTGGAGFVGANLVTTLLDRGHWVRSFDRAPSLLP--A------HPQLEVLQGDITDADVCAAAVD--GIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAG-VQRFVYTSSNSVVMGGQNI---------------AGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWGNGDQT-----MFRKLFESVL---KG--HVKVLVGRKSARLDNSYVHNLIHGFILAAAHLVPDGTAPGQAYFINDA--EPINMFEFARPVLEACGQRWPKMRISGPAVRWVMTGWQRLHFRFGFPAPLLEPLAVERLYLDNYFSIAKARRDLGYEPLFTTQQALTECLPYYVSLFEQMKNEARAEKTAATVKP |
| 1ORR Chain:A ((2-339)) | --------------AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSI----DNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL--DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANV---SKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRF--TNLP----------------------VR----ESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ORR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138742 for 2635 contacts (-52.7/contact) +
2D Compatibility (PS) -32135 + (NN) -12421 + (LL) 5540
1D Compatibility (HY) -15200 + (ID) 3250
Total energy: -196208.0 ( -74.46 by residue)
QMean score : 0.462
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