Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGSATVEKRLDFGLLGPLQMTIDGTPVPSGTPKQRAVLAMLVINRNRPVGVDALITALWEEWPPSGARASIHSYVSNLRKLLGGAGIDPRVVLAAAPPGYRLSIPDNTCDLGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALNERILRQQPLDAKKSAKTTAAGTVTVLDQRTMASGQQAVAYLHDIASG-RGYPLQAAATRIGRLHDNDIVLD---------SANVSRHHAVIVDT-----GTNYVINDLRSSNGVHVQHERIR--SAVTLNDGDHIRICDHE-FTFQISAGTHGGT |
| 1GXC Chain:A ((29-144)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PWARLWALQDGFANLECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDH-SGNGTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVD-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1GXC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -70338 for 691 contacts (-101.8/contact) +
2D Compatibility (PS) -10231 + (NN) -256 + (LL) 19636
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: -67039.0 ( -97.02 by residue)
QMean score : 0.458
|
|
|