Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLATIDKFAYEKSMLINVGDEKGTLLDAAVRRADPALALELGTYLGYGALRIAR-AAPEARVYSVELAEANASNARRIWAHAGVDDRVVCVVGTIGDGGRTLDALTEHGFATGTLDFVFLDHDKKAYLPDLQSILDRGWLHPGSIVVADNVRVPGAPKYRAYMRRQQGMSWNTIEHKTHLEYQTLVPDLVLESEYLG
5FHR Chain:A ((23-202))
VLEAIDTYCTQKEWAMNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQD----LIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLADNVIVPGTPDFLAYVRGSS--SFECTHYSSYLELMKVV-----------
General information:
TITO was launched using:
RESULT:
Template:
5FHR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87780 for 1389 contacts (-63.2/contact) +
2D Compatibility (PS) -19515 + (NN) -6101 + (LL) 448
1D Compatibility (HY) -17600 + (ID) 3450
Total energy: -133998.0 ( -96.47 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_5FHR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5FHR-query.scw
PDB file :
Tito_Scwrl_5FHR.pdb
: