Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRRSPKGSPGAVLDLQRRVDQAVSADHAELMTIAKDANTFFGAESVQDPYPLYERMRAAGSVHRIANSDFYAVCGWDAVNEAIGRPEDFSSNLTATMTYTAEGTAKPFEMDPLGGPTHVLATADDPAHAVHRKLVLRHLAAKRIRVMEQFTVQAADRLWVDGMQDGCIEWMGAMANRLPMMVVAELIGLPDPDIAQLVKWGYAATQLLEGLVENDQLVAAGVA--LMELSGYIFEQFDRAAADPRDNLLGELATACASGE-LDTLTAQVMMVTLFAAGGESTAALLGSAVWILATRPDIQQQVRANPELLGAFIEETLRYEPPFRGHYRHVRNATTLDGTELPADSHLLLLWGAANRDPAQFEAPGEFRLDR-AGGKGHISFGKGAHFCVGAALARLEARIVLRLLLDRTSVIEAADVGGWLPSILVRRIERLELAVQ |
| 2JJO Chain:A ((53-373)) | ----------------------------------------------------------------------------------VFRHADVQTVLRDTATFSSDPTRVIEGASPTPGMIHEI---DPPEHRALRKVVSSAFTPRTISDLEPRIRDVTRSLLADAGE--SFDLVDVLAFPLPVTIVAELLGLPPMDHEQFGDWSGALVDI-QMDDPTDPALAERIADVLNPLTAYLKARCAERRADPGDDLISRLVLAEVDGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPGRIPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIAR----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178194 for 2495 contacts (-71.4/contact) +
2D Compatibility (PS) -34770 + (NN) -24384 + (LL) 8380
1D Compatibility (HY) -10800 + (ID) 5150
Total energy: -244918.0 ( -98.16 by residue)
QMean score : 0.430
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