Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------MATSKVERLV-NLVIALLSTRGYITAEKIRSSVAGYSDSPSVEAFSRMFERDKNELRDLGIPLEVGRVSALEPTEGYRINRDAY---ALSPVELTPDEAAAVAVATQLWESPELITATQGA----LLKLRAAGVDVDPLDTGAPVAIASAAAVSGLRGSEDVLGILLSAIDSGQVVQFSHRS-------SRAEPYTVRTVEPWGVVTEK---------GRWYLVGHDRDRDATRVFRLSRIGAQVTPIGPAGATTVP----------AGVDLRSIVAQKVTEVPTGEQATVWVAEGRATALRRAGRSAGPRQLGGRDGEVIELEIRSSDRLAREITGYGADAIVLQPGS-LRDDVLARLRAQAGALA---------------- |
| 3ACP Chain:A ((1-417)) | MTKTITVAHIQYDFKAVLEENDENDDEFYINVDKNLNEIKEHKIVVLGNSRGVDAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRAD-----YTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDM--QLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSAS------LDGT-----IRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYE-NGMLAQWDLRSPECPVGEFLINEG--TPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDEVSQFCYVSDDESNGEVLEVGKNNFCALYNLSNP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ACP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28578 for 2326 contacts (-12.3/contact) +
2D Compatibility (PS) -31475 + (NN) 3432 + (LL) 1872
1D Compatibility (HY) -11200 + (ID) 2550
Total energy: -68499.0 ( -29.45 by residue)
QMean score : 0.059
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