Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------MTALEVLGGWPVPAAAAAVIGPAGVLATHGDTARVFALASVTKPLVARAAQVAVEEGVVNLDTPAG--------------------------PPGSTVRHLLAHTSGLA---MHSDQALAR------------------------PGTRRMYSNYGFTVLAESVQRESGIEFGRYLTEAVCEPLGMVTT--RLDGGPAAA---------------------------------GFGATSTVADLAVFAGDLLR-------PSTVSA-------QMHADATTVQFPGLDGVLPGYGVQRPNDWGLGFEIRNSKSPHWTGECNSTRTFGHFGQSGGFIWVDPKADLALVVLT--ARDFGDWALDLWPAISDAVLAEYT-- |
| 3HLF Chain:A ((8-432)) | HHSSGLVPRGSHMGSIIDAAAAAGPVVLMETAFRKAVESRQIPGAVIMARDASGNLNYTRCFGARTVRRDENNQLPPL-------QVDTPCRLAAATKLLTTIMVLQCMERGLVDLDETVDRLLPDLSAMPVLEGFDDAGNARLRERRGKITLRHLLTHTSGLSYVFLHPLLREYMAQGYLQSAEKFGIQSRLAPPAVNDPGAEWIYG-TNLDWAGKLVERATGLDLEQYLQENICAPLGITDMTFKLQQRPDMLARRADQTHRNSADGRLRYDDSVYFRADGEECFGGQGVFSSPGSYMKVLHSLLKRDGLLLQPQTVDLMFQPALEPRLEEQMNQHMDASPHINYGGPMPMVLRRSFGLGGIIALEDLDGENWRRKGSLTFGGGPNIVWQIDPKAGLCTLAFFQLEPWNDPVCRDLTRTFEHAIYAQYQQG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125298 for 1991 contacts (-62.9/contact) +
2D Compatibility (PS) -28242 + (NN) -10740 + (LL) 184
1D Compatibility (HY) -10400 + (ID) 3000
Total energy: -177496.0 ( -89.15 by residue)
QMean score : 0.379
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