Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVWLRAGALVAAVMLSLSGCGGFHAGAPSTAGPCEIVPNGTPAPKTPPATVPSSRNLATNPEIATGYRRDMTVVRTAHYAAATANPLATQVACRVLRDGGTAADAVVAAQAVLGLVEPQSSGIGGGGYLVYFDARTGSVQAYDGREVAPAAATENYLRWVSDVDRSAPRPNARASGRSIGVPGILRMLEMVHNEHGRTPWRDLFGPAVTLADGGFDISARMGAAISDAAPQLRD------DPEARKYFLNPDGSPKPAGTRLTNPAYSKTLSAIASAGANAFYSGDIAHDIVAAASDTSNGRTPGLLTIEDLAGYLAKRRQPLCTTYRGREICGM--PSSGGVAVAATLGILEHFPMSDYAPSKVDLNGGRPTVMGVHLIAEAERLAYADRDQYIADVDFVRLPGGSLTTLVDPGYLAARAALISPQHSMGSARPGDFGAPTAVAPPVPEHGTSHLSVVDSYGNAATLTTTVESSFGSYHLV--DGFILNNQLSDFSAEPHATDGSPVANRVEPGKRPRSSMAPTLVFDHSSAGRGALYAVLGSPGGSMIIQFVVKTLVAMLDWGLNPQQAVSLVDFGAANSPHTNLGGE-NPEINTSDDGDHDPLVQGLRALGHRVNL---AEQSSGLSAITRSE-A-GWAGGADPRREGAVMGDDA |
| 2NLZ Chain:A ((15-539)) | ----------------------------------------------------------------------RRNVVYAKNGMVATSQPLAAQAGLDILKAGGNAIDAAIATATALTVLEPTSNGIGSDAFALVWTKG--KLHGLNGSGRAPMSLTMEAV--KAKG-YEQ--ELPPYGVIPVTVPGAPGAWAELAKMYGNLPLAASLAPAIRYAEEGYPVTPTLAKYWKAAYDRVKTEWTDDVYQPWFDTFA-PKGRAPRVGEVWRSQGHADTLRSIAESNGESFYRGELADQIHAFFDK-----HGGYLTKEDLACYRPEWVEPISIDYRGYRVWEIPPNGQGLV-ALEALNIVKGFEFYHK-----------DTVDTYHKQIEAMKLAFVDGMKYVTEPSDMSVS---VEQLLSDEYATERRKEIGE-QALT------PE-----PGTP----TVYLATADGDGNMVSFIQSNYMGFGSGVVVPGTGIAMQNRGHNFSLDPN------HDNALKPGKRTYHTIIPGFLTK-----NDQPIGPFGVMGGFMQPQGHMQVMMNTIDFGLNPQAALDAPRWQ------WTNGKQVQVEP-----TFPVDIAQALVRRGHKIQVVLDEGAFGRGQIIWRDPTTGVLAGGTEPRTDGQVAAW-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NLZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230723 for 4879 contacts (-47.3/contact) +
2D Compatibility (PS) -54334 + (NN) -28178 + (LL) 2176
1D Compatibility (HY) -16400 + (ID) 6350
Total energy: -333809.0 ( -68.42 by residue)
QMean score : 0.476
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