Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFG-PEWVGVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGA-----AAGHALVLGSGGTAPAAVVGLAELGVTDITVVARNS---DKAARLV-DLGTRVGVATRFCAFDSG-GLADAVAAAEVLVSTIPAEVAAGYA-------GTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVEQFTGLPAPREAMTCALAALD |
| 3T4E Chain:A ((30-309)) | ---KYELIGLMAYPIRHSLSPEMQNKALEKAGL-PYTYMAFEVDNTTFASAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAAKLVGAINTIVNDDGYLRGYNTDGTGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFELWTGKAFPLDYVKQVMG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T4E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186962 for 2262 contacts (-82.7/contact) +
2D Compatibility (PS) -28038 + (NN) -10373 + (LL) 572
1D Compatibility (HY) -11600 + (ID) 3500
Total energy: -239901.0 ( -106.06 by residue)
QMean score : 0.423
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