Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIDIVTIFPACLDPLRQ-SLPGKAIESGLVDLNVHDLRRWTHDVHHSVDDAPYGGGPGMVMKA-------PVWGEALDEICSSETLLIVPTPAGVLFTQATAQRWTTESHLVFACGRYEGIDQRVVQDAARRMRVEEVSIGDYVLPGGESAAVVMVEAVLRLLAGVLGNPASHQDDSHSTGLDGLLEGPSYTRPASWRGLDVPEVLLSGDHARIAAWRREVSLQRTRERRPDLSHPD
4H3Z Chain:B ((22-248))
MQFDIVTLFPDMFRALTDWGITSRAAKQERYGLRTWNPRDFTTDNYRTIDDRPYGGGPGMVMLARPLEDAINAAKAAQAEQGIGGARVVMMSPQGATLNHDKVMRFAAEPGLILLCGRYEAIDQRLID----RVVDEEVSLGDFVLSGGELPAMALIDAVVRHLPGVLNDAQSAVQDSF---VDGLLDCPHYTRPEEYDGVRVPDVLLGGHHAEIEQWRRREALRNTWLKRPDL----
General information:
TITO was launched using:
RESULT:
Template:
4H3Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123700 for 1504 contacts (-82.2/contact) +
2D Compatibility (PS) -23825 + (NN) -12282 + (LL) -36
1D Compatibility (HY) -16800 + (ID) 4650
Total energy: -181293.0 ( -120.54 by residue)
QMean score : 0.325
(partial model without unconserved sides chains):
PDB file :
Tito_4H3Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H3Z-query.scw
PDB file :
Tito_Scwrl_4H3Z.pdb
: