Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRIIGGVAGGRRIAVPP-RGTRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERLFANV
2FPO Chain:A ((14-191))
-IRIIGGQWRGRKLPVPDS------TDRVRETLFNWLAPV--IVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQ-KGTPHNIVFVDPPFRRG--LLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQR-----
General information:
TITO was launched using:
RESULT:
Template:
2FPO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116365 for 1396 contacts (-83.4/contact) +
2D Compatibility (PS) -18855 + (NN) -9347 + (LL) 732
1D Compatibility (HY) -10800 + (ID) 2950
Total energy: -157585.0 ( -112.88 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_2FPO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FPO-query.scw
PDB file :
Tito_Scwrl_2FPO.pdb
: