Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSLAERTVLVTGANRGMGREYVAQLLGRKVAKVYAATRNPLAIDV---SDPRVIPLQLDVTDAVSVAEAADLATDVGILINNAGISRASSVLDKDTSALRGELETNLFGPLALASAFADRIAERS--GAIVNVSSVLAWLPLGMS--YGVSKAAMWSATESMRIELAPRGVQVVGVYVGLVDTDMGRFADAPKSDPADVVRQVLDGIEAGKEDVLADEMSRQVRASLNVPARERIARLMGN
1WNT Chain:D ((5-208))
---LAGRRVLVTGAGKGIGRGTV-QALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ---ATWSDPHK-AKTMLNRIPLGK------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WNT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77516 for 1534 contacts (-50.5/contact) +
2D Compatibility (PS) -21321 + (NN) -7926 + (LL) 3320
1D Compatibility (HY) -10800 + (ID) 3350
Total energy: -117593.0 ( -76.66 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_1WNT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WNT-query.scw
PDB file :
Tito_Scwrl_1WNT.pdb
: