Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRGTDEKYGLPPQPDSDRMTRRTLPVLGLAHELITPTLRQMADRLDPHMRPVVSYHLGWSDERGRPVNNNCGKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDLMDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATRELIRGQAADTAFESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLPVTWTVAHGGSAG-RRLAAWLVDETGSQTASDDELAAVAELIECGGGRRWASAEARRHVTQGIDMVARIGIPDRPAAELQDLAHYIVDRQA |
4JXY Chain:A ((28-345)) | ----------------------ILSLAEPDMLAVNQLIQKQVNSDVSLINQLGFYIV-----------NSGGKRLRPLLTVLAARALNIQTEQHHTLAAIIEFIHTATLLHDDVVD---------TANEVFGNQASVLVGDFLYTRSFQMMVTLDS---MRVMQILSDATNVIAEGEVLQLMNCNDPDTTEESYMEVIYSKTARLFEAATLLAGVLTKQSEAIENAMQDYGKYLGTAFQLVDDIMDYA----------GDDLAEGKPTLPLLYAMWHGNEQQTAIIREAIETG-----NGMDNLTPILETMEQTGALTYTKQQALKASQQAIDALSPIEES-VYKEALIGLAHISVERVA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JXY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166521 for 2575 contacts (-64.7/contact) +
2D Compatibility (PS) -32684 + (NN) -19209 + (LL) 952
1D Compatibility (HY) -14800 + (ID) 3650
Total energy: -235912.0 ( -91.62 by residue)
QMean score : 0.460
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