Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVAR-RGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELISD-RAITGKPLILTSNRAPNNWYGLF-PNPVVAESLLDRLINTSHQILMDGPSYRPRKRPGRTTS |
2QGZ Chain:A ((152-300)) | ----------------------------------------------------------------------------------------------------QKGLYLYGDMGIGKSYLLAAMAHELSEKKGVSTTLLHFPSFAIDVKNAIS----KEEIDAVKNVPVLILDDIGA------VRDEVLQVILQYRMLEELPTFFTSNYSFADLERKWA---WQAKRVMERVRYLAREFHLEGANRR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61114 for 894 contacts (-68.4/contact) +
2D Compatibility (PS) -13346 + (NN) -4156 + (LL) 8524
1D Compatibility (HY) -8400 + (ID) 1350
Total energy: -79842.0 ( -89.31 by residue)
QMean score : 0.485
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