Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPSKAKVAIVGSGNISTDLLYKLLRSEWLEPRWMVGI-DPESDGLA-RAAKLGLETTHEGVDWLLAQP--DKPDLVFEATSAYVHRDAAPKYAEAGIRAIDLTPA--AVGPAVI-PPANLREHLDAPNVNMITCGGQATIPIVYAVSRIVEVPYAEIVASVASVSAGPGTRANIDEFTKTTARGVQTIGGAARGKAIIILNPADPPMIMRDTIFCAIPTDADREAIAASIHDVVKEVQTYVPGYRLLNEPQFDEPSINSGGQALVTTFVE----VEGAGDYLPPYAGNLDIMT--AAATKVGEEIAKETLVVGGAR-------------------------------------- |
2HJS Chain:A ((5-338)) | --QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGD------VDSFDFSSVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFLLSSPCAVAAELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQ-----------VGAVDAEGHSAIERRIFAEVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQCAEPVDLAAVTRVLDATKG-IEWVGEGDYPTVVGDALGQDETYVGRVRAGQADPCQVNLWIVSDNVRKGAALNAVLLGELLIKHYL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HJS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49688 for 2146 contacts (-23.2/contact) +
2D Compatibility (PS) -29643 + (NN) -7624 + (LL) 1804
1D Compatibility (HY) -6400 + (ID) 2550
Total energy: -94101.0 ( -43.85 by residue)
QMean score : 0.140
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