Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH----RAMIVAGGSNRTDTVNLALTVL------SGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGG-QVQVVDGDPLAFKITTKLDLLLAQAIVRG---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4CVH Chain:A ((1-411)) | -SMHPQAVAAVLPAGPT--------PKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVMKSIIQKYQHKRISLVEAGVTRHRSIFNGLKALAEDQINSKLSKPEVVIIHDAVRPFVEEGVLLKVVTAAKEHGAAGA-IRPLVSTVVSPSADGCLDYSLERARHRASEMPQAFLFDVIYEAYQQCS-DYDLEFGTECLQLALKYCCTKAKLVEGSPDLWKVTYKRDLYAAESIIKERISQEICVVMDTEEDNKHVGHLLEEVLKSELNHVKVTSEALDQCYNFVCVNVTTSDFQETQKLLSMLEESSLCILYPVVVVSVHFLDFKLVPPSQKMENLMQIREFAKEVKERNILLYGLLISYPQDDQKLQESLRQGAIIIASLIKERNSGLIGQLLIA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4CVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -156123 for 1761 contacts (-88.7/contact) +
2D Compatibility (PS) -24575 + (NN) -16918 + (LL) 808
1D Compatibility (HY) -12800 + (ID) 3200
Total energy: -212808.0 ( -120.84 by residue)
QMean score : 0.442
|
|
|