Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPVVKINAIEVPAGAGPELEKRFAHRAHAVENSPGFLGFQLLRPVKGEERYFVVTHWESDEAFQAWANGPAIAAHAGHRANPVATGASLLEFEVVLDVGGTGKTA
1IUJ Chain:A ((1-102))
-MFVTMNRIPVRPEYAEQFEEAFRQRARLVDRMPGFIRNLVLRPKNPGDPYVVMTLWESEEAFRAWTESPAFKEGHARSGTLPKEAFLGPNRLEAFEVVLDSE--
General information:
TITO was launched using:
RESULT:
Template:
1IUJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28274 for 655 contacts (-43.2/contact) +
2D Compatibility (PS) -11578 + (NN) -7406 + (LL) 404
1D Compatibility (HY) -5600 + (ID) 1450
Total energy: -53904.0 ( -82.30 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_1IUJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IUJ-query.scw
PDB file :
Tito_Scwrl_1IUJ.pdb
: