Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLKKTLHLSSLSLASLALSSAALAAAPVMLDQGKEWTESHRQDFYSRDQGSQVMPLPWLKALRQPDGTPFLADSLARYGYLPNPKAPAEGLPVGFTVAGTGARQMVGMTCSACHTRQIEVKGTAYRIDGGPAIVDFQAFLADLDRAVGPLTSDDAAFDAFAKPILGANPPPGARDALLAAVKEWYEPYHTLIERALPKDTWGPARLDAVSMIFNRLTGLDIGTAPPYLIPD--NIKAADAPVRYPFLWNAARQNKTQWPGFAANGNDLLGLARNVGEVYGVFATFHPQKSKFHLLGMDYLKINSANFHGLGKLEDLIKKIGPPKWPWAVDKHLARKGALIFARKTDEGGCVECHGIRIKDLVLWDTPLRDVGSDSRQHAILDGQVQTGVMEGARMPFGQPLKATDGAFDVLAVAVAGSILQHFVPILGEKHDAKAAAVKPESVMTDETRQLLTAFQKPVRTQADPYPYESRVLQGIWAAAPYLHNGSVPTLEELLKPAAERVESFPVGSAYDVDKVGLAAQQTQFGSYVLKTTGCEQRDSGNSRCGHEYGTSLSAEEKRALLEYLKVL |
| 4DGK Chain:A ((1-492)) | MKP-----------TTVIGAGFGGLALAIRLQAAGIPVLLLEQRYVYEDQG---------------------------------------------------------------------------FTFDAGPTVITDPSAIEELFALAGKQLKEYV-------ELLPVTPF--------------------------------------YRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLGTVPF--------LSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPTSSIYTLIHALEREWGVWFPR----GGTGALVQGMIKLFQDLGGEVV------LNARVSHMETTGNKIEAVHLEDGRRFLTQ-------AVASNADSNSLFVLYFGLNHHHDQLAHHTVCFGPRLAEDFSLYLHAPCVTDSSLAPEGC---GSYYVLAPV------PHLGTANLDWTVEGPKLRDRIFAYLEQHYMPGLRSQLVTHRMFTPFDFRTITNLYLVGAGIPGVIGSAKATAGLMLEDLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8856 for 3351 contacts (-2.6/contact) +
2D Compatibility (PS) -41835 + (NN) -9737 + (LL) 8796
1D Compatibility (HY) -10000 + (ID) 2650
Total energy: -64282.0 ( -19.18 by residue)
QMean score : 0.102
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