Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNPRLAACQALAAVLAGRASLSGALPPQLDKVAPRDRGLTQELAFGAARWQPRLQALAARLLQKPFKAADTDIHALLLIGLYQLLYTRIPPHAAIGETVGCADKLKKGWAKGVLNAVLRRAQREGETLLAEVDRDPSARLGHPRWLLKALKQAWPEQLDALCAANNAHPPMTLRVNRRHGERDAYLAELAEAGIKARACDYSRDGIQLAAPRDVRELPGFAEGRVSVQDEAAQLAAEQLESAPGQRVLDACCAPGGKTCHLLETQPELAEVVAVDLEESRLVRVRENLQRLGLQAS-------LVAADARATGEWWDGKPFQRILLDAPCS--ATGVIRRHPDIKLARKPEDIAALAHLQGELLDALWPTLEVGGVLLYATCSVMPAENSDSIAAFLARTPGARELDLPG--------------PWGMKQPHGRQLLPQVEGH-DGFYYAKLIKISAR |
4FP9 Chain:A ((15-360)) | --------------------------------------------------------PAVRLALQNFDMTYSVQFGDLWPSIRVSLLSEQKYGALVNNFAA-------------WDHVSAKLEQLSAKDFVNEAISHWELQPSP-------------------ASWACSPNLRCFTFDRGDISRFPPARPGSLGVM----------------------------EYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL-EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQVGELVIPNLMANFGPMYFCKMRRLT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79647 for 2619 contacts (-30.4/contact) +
2D Compatibility (PS) -33239 + (NN) -13027 + (LL) 8560
1D Compatibility (HY) -11600 + (ID) 3400
Total energy: -132353.0 ( -50.54 by residue)
QMean score : 0.278
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