Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKSEPRVFINPEFEPLTEDMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHRQQA
1BS4 Chain:B ((1-166))
-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA
General information:
TITO was launched using:
RESULT:
Template:
1BS4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71065 for 1283 contacts (-55.4/contact) +
2D Compatibility (PS) -17603 + (NN) -4862 + (LL) 328
1D Compatibility (HY) -18800 + (ID) 4700
Total energy: -116702.0 ( -90.96 by residue)
QMean score : 0.747
(partial model without unconserved sides chains):
PDB file :
Tito_1BS4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BS4-query.scw
PDB file :
Tito_Scwrl_1BS4.pdb
: