Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGERLMPLSLDLLRVFESAARQLSFTAAAEELGTTQPAVSQQIKRLEKELATPLFQRVHRGIVLTDAGQLLLRHVAAGLE-TIDAGIAALGARQRHEVLQVATDYAFAAYWLMPRLPRFHQAHPHLDVSLVTSERGLAGQ---RGDIDVAILFGDGRSKHGEAHRL-FREEVFPVCSPRLVEGLQLPLAKAHLARLP-MLHLKPAQHARWFDWPALFEALAIDRQPIPAVLSFDNYTL-LIQ-AAIAGQGVAI-GWRHLVDGLLEQGLLC-RPIGESCLSRYGYYAVLPERKRRQRLVDGFVDWLQAELQAGGA |
3FZV Chain:A ((4-300)) | -------YTLRQLKYFVTTVECGSVAEASRKLYIAQS-ISTAVKGLEESFV---------QLFLTPAGARFYRKAQELLRMAHEFEQNLADNDVIAGQIDIGCFETVAPLYLPGLIAGFRQAYPGVEIRIRDGEQQELVQGLTSGRFDLAFLYEHDLDSTIETEPLMPPQRPHALLPEGHRFAGQAQVSLRDLCLEPMILLDVQ-------PSRTYFVSLFEELGLTPNIAFSSPSIEMVRGMVG-QGFGFSLLVTRPHSECTYDGKKVVMVDLAEP-VSTSGLAAAWLKRAQLTKPARLFVDYCREQLGK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153161 for 2008 contacts (-76.3/contact) +
2D Compatibility (PS) -29325 + (NN) -7605 + (LL) 2304
1D Compatibility (HY) -8000 + (ID) 2500
Total energy: -198287.0 ( -98.75 by residue)
QMean score : 0.402
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