Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDNDDRIKLEASWKEALREEFDKPYMKQLGEFLRQEKAAGKVIFPPGPLIFNALNTTPLENVKVVIIGQDPYHGPGQAHGLCFSVQPGV-PTPPSLQNIYKELNRDLNIPIPNNGYLQRWAEQGVLLLNTSLTVEQAKAGSHANAGWQPFTDRVIEVVNERCERLVFLLWGSHAQSKQKLIDPQRHLILKSAHPSPLSAYRGFLGNGHFSRTNKFLEQNGKTPIDWSLPDL
4WRW Chain:A ((21-238))
---------VERGWAAALEPVADQ--VAHMGQFLRAEIAAGRRYLPAGSNVLRAF-TFPFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADLGYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP--
General information:
TITO was launched using:
RESULT:
Template:
4WRW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89188 for 1785 contacts (-50.0/contact) +
2D Compatibility (PS) -23979 + (NN) -14742 + (LL) 292
1D Compatibility (HY) -19600 + (ID) 4950
Total energy: -152167.0 ( -85.25 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_4WRW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WRW-query.scw
PDB file :
Tito_Scwrl_4WRW.pdb
: