Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVLIVYAHPEPRSLNGALKDFAVARLEAAGHAVQVSDLYAMGWKA-VLDAGDSLEREASERFDPSATSLRAFENGWQSVDIAGEQDKLRWADTLILQFPLWWFSMPAILKGWIDRVYACGFAYGVGEHSDSHWGDRYGEGRMQGKRAMLVVTAGGWESHYAARGINGPMDDLLFPIHHGILHYPGFEVLPPFVVYRSGRIDAERFAALSEQLGRRLDDLQRAAPIPFRRQNGGDYLIPALTLRDELAPQRAGFAMHLAE
2QX6 Chain:B ((4-221))
-KVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTLSNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRVLCQGFAFDIPGFYDS--------GLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFCGFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ------------------------
General information:
TITO was launched using:
RESULT:
Template:
2QX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146651 for 1704 contacts (-86.1/contact) +
2D Compatibility (PS) -23220 + (NN) -8104 + (LL) 1644
1D Compatibility (HY) -17600 + (ID) 4600
Total energy: -198531.0 ( -116.51 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_2QX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QX6-query.scw
PDB file :
Tito_Scwrl_2QX6.pdb
: