Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDITQAAIVTGASRGIGRAIARRLAADGFAVAVNYASNQAMADEVVAEIVAAGGAAIAVQGDVASAEDMDKLFEATRGAFGRIDVVVNSAGTMPYLKIADGDLEGFDRVIRTNLRGAFIVLGLAARHV--ERGGRIIALSTSVIARALPSYGPYIASKSGVEGLVHVLANELRGQDIRVNAVAPGPVATELFFNGKSAEQIDQIARLAPLERLGEPDEIAAAVSFLAG-PDGAWVNSQVLRVNGGFA
4DMM Chain:C ((24-266))
LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDM----------EKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLV
General information:
TITO was launched using:
RESULT:
Template:
4DMM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160516 for 2076 contacts (-77.3/contact) +
2D Compatibility (PS) -24778 + (NN) -5641 + (LL) 620
1D Compatibility (HY) -17600 + (ID) 5200
Total energy: -213115.0 ( -102.66 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_4DMM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DMM-query.scw
PDB file :
Tito_Scwrl_4DMM.pdb
: