Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDTSPDLPAMSPLAVYRQAVEQRGFAPDEAQRRAAEALERCFQALHEAHRHGAIQGVYLWGPVGRGKTWLMDHFYQCLRVPARRQHFHHFM--QW--VHQRQFELTGT--------ADPLRAL-AREL-ARDVRVLCFDELFVSDIG--DAILLGSLLRIMFEEGVVLVATSNQPPEQLYADGFNRERFLPAIEAIQRHMAVVAVDGGQDHRLHPGRAEQRYWVVEAGQASGFAELFARLSAGEAASTQPIELGHRPLAVHRHSESVLWCSYAQLCEAPLSALDFIGLCDRYRAILMDDLPCLSASQREGRIARGTEDGAQLVEAGDRELPQLSVHDDGVRRFIALVDECYDRKVPLYLEARVPLEALYTEGYLAFAFRRTLSRLREMQLARFGSDSAG |
2R8R Chain:A ((5-126)) | -----------------------------------------------------GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVETHGRAETEALLNGLPQQPLLRTEYRGMTLEEMDLDALLKAAPSLVLVDELAHTNAPGSRHTKRWQDIQELLAAGIDVYTTVNV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R8R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70682 for 760 contacts (-93.0/contact) +
2D Compatibility (PS) -11395 + (NN) -4184 + (LL) 20108
1D Compatibility (HY) 1200 + (ID) 850
Total energy: -65803.0 ( -86.58 by residue)
QMean score : 0.278
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