Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNMPSILSLAVAGLLVAPVHAATAPSEPFQPPAESSLPDNAFGEMVRQGQALFVETRKNAPHLVGNQLNCVNCHLDQGRRANSAPQWAAYPVYP-AFRAKNNKVNTFAERLQG--CFQFSMNGKVPAADSPEIKALTVYAYWLASQAPTGVSLPGRGYPDVAPPEGGYSIERGAKVYAA--------QCAICHGADGQGQMALGQTVFPPLWGAQSFNWGAGMHRINTAASFIKYNMPLGKPGTLSDRDAWDVAAFMNSHERPQDPRLVDGSVEKTRQKFHANDGVNLYGQKVNGVLLGQGI |
1H1O Chain:A ((12-183)) | ----------------------------------------------------VS-------------SDCMVCHGMTGRDTL-YPIVPRLAGQHKSYME--AQLKAYKDHSRADQNGEIYMWPVAQALDSAKITALADYFNAQKPPMQSS-------------GIKHAGAKEGKAIFNQGVTNEQIPACMECHGSDGQGAG-----PFPRLAGQRYGYIIQQLTYFHN-GTRVNTLMNQIA-KNITVAQMKDVAAYLSSL------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H1O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36687 for 1250 contacts (-29.3/contact) +
2D Compatibility (PS) -16251 + (NN) -2803 + (LL) 5744
1D Compatibility (HY) -2000 + (ID) 1650
Total energy: -53647.0 ( -42.92 by residue)
QMean score : 0.182
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