Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRIFADNAQSIGNTPLVQINRIA-PRGVTILAKIEGRNPGYSVKCRIGANMIWDAEASGRLK--SGMTLVEPTSGNTGIGLAFVAAARGYKLILTMPASMSLERRKVLKALGAELVLTEPAKGMKGAIQKA----EELVAGDPGKYFMPQQFDNPANPAIHEKTTGPEIWNDTEGAVDVLVSGVGTGGTLTGVSRYIKNTRGKPILAVAVEPVTSPVISQTLAGEEVKPAPHKIQGIGAGFVPKNLDLSLVDRVEKIGDDEAKNMALRLMQEEGILCGISSGAAMAAAVRLAEEPNMQGKTIVVILPDSGERYLSSMLFDGLFSEQELTQ |
| 2EFY Chain:A ((6-301)) | ----------AIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEELGA------FMPDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKE-RIPHVKVIAVEPARSNVLSGGKMGQ------HGFQGMGPGFIPENLDLSLLDGVIQVWEEDAFPLARRLAREEGLFLGMSSGGIVWAALQVARELG-PGKRVACISPDGGWKYLSTPLY----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EFY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135817 for 2683 contacts (-50.6/contact) +
2D Compatibility (PS) -32277 + (NN) -13520 + (LL) 1656
1D Compatibility (HY) -22000 + (ID) 7600
Total energy: -209558.0 ( -78.11 by residue)
QMean score : 0.506
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