Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNKNNLRYALGALALSVSAASLAAPSEAQQFTEFWTPGKPNPSICKSPLLVSTPLGLPRCLQASNVVKRLQKLEDIASLNDGNRAAATPGYQASVDYVKQTLQKAGYK-VSVQPFPFTAYYPKGP--GSLSATVP----QPVTYEWE-----------KDFTYLSQTEAGDVTAKVVPVDLSLGAGNTSTSGCEAEDFA------NF-PAGSIALIQRGTCNFEQKAENAAAAGAAGVIIFNQGNTD---------------------------------------------------DRKGLENVTVGESYEGGIPVIFATYDNG---VAWSQTP-------------D--LQLHLVVDVVRKKTETYNVVAETRRG-NPNNVVMVGAHLDSVFEGPGINDNGSGSAAQLEMAVLLAKA-----LPVNKVRFAWWGAEEAGLVGSTHYVQNLAPEEKKKIKAYLNFDMIGSPNFGNFIYDGDGSD---FGLQ-----GPPGSAAIERLFEAYFRLRGQ----QS-EGTEIDFRSDYAEFF-NSGIAFGGLFTGAEGLKTEEQAQKYGGTAGKAYDECYHSKCDGIANINQ------DALEIHSDAMAFVTSWLSLSTKVVDDEIAAAGQKAQSRSLQMQKSASQIERWGHDFIK |
| 3FED Chain:A ((13-552)) | ----------------------------------------------------SIRWKLVSEMKAENIKSFLRSFT------KLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKLVHYDVLLSYPNETNANYISIVDEHETEIFKTS---PPPDGYENVTNIVPPYNAFS---------AQGMPEGDLVYVN-YAR-TEDFFKLEREMGINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGGIAPPDKSWKGALNVSYSIGPGFTGS-SFRKVRMHVYNINKITRIYNVVGTIRGSVEPDRYVILGGHRDSWV--FGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEFGLLGSTEWAEENVKILQERSIAYINSDSSIEGNYTLRVD-CTPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSPENKNLPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKT-----------DKYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALVYELVDS-KIIPF-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74610 for 3584 contacts (-20.8/contact) +
2D Compatibility (PS) -44660 + (NN) -19554 + (LL) 7592
1D Compatibility (HY) -4800 + (ID) 4200
Total energy: -140232.0 ( -39.13 by residue)
QMean score : 0.408
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