Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKDA----GVTIDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETVRHRLSVYHSQTKPLVDFYQKLSAAEGTPKYHSIAGVGSVEQITAKVLSALS
2P3S Chain:A ((1-188))
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSE-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2P3S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61764 for 1389 contacts (-44.5/contact) +
2D Compatibility (PS) -20047 + (NN) -10371 + (LL) 2132
1D Compatibility (HY) -16000 + (ID) 4800
Total energy: -110850.0 ( -79.81 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_2P3S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P3S-query.scw
PDB file :
Tito_Scwrl_2P3S.pdb
: