Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVAPRDSAAQAASAVAESVRYQGRKASRQGSEQRRQAILDAAMRLIVRDGVRAVRHRAVAAEAQVPLSATTYYFKDIDDLITDTFALFVERNAEALSAFWSSVEGDLQEMAAVLADDPGARGSLVERIVELAVQYVQVQLTERREHLLAEQAFRQEALLNPRLRELADAHQRILSLGAVHFFQVLGSGQPEQDAKVLTSIILQMEYQGLVDGVEQLAVDEMRAILRRYLNLVMGL
3HTA Chain:A ((20-200))
--------------------------HMPRRHDPERRQRIIDAAIRVVGQKGIAGLSHRTVAAEADVPLGSTTYHFATLDDLMVAALRQANEGFARVVAAHPAL---------------SDPEADLSGELARVLGEWL----GGDRTGVELEYELYLAALRRPALRPVAAE----WAEGVGALLAAR---TDPTTARALVAVLDGICLQVLLTDTP-YDEEYAREVLTRLIPVP---
General information:
TITO was launched using:
RESULT:
Template:
3HTA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104361 for 1347 contacts (-77.5/contact) +
2D Compatibility (PS) -20022 + (NN) -11311 + (LL) 4468
1D Compatibility (HY) -8400 + (ID) 2350
Total energy: -141976.0 ( -105.40 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_3HTA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HTA-query.scw
PDB file :
Tito_Scwrl_3HTA.pdb
: