Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALQRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKADAGTIRADFAVSIDENAVHGSDSEASAAREIAYFFAATEVCERIR
3Q8Y Chain:B ((1-137))
--MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEIT----
General information:
TITO was launched using:
RESULT:
Template:
3Q8Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62361 for 1057 contacts (-59.0/contact) +
2D Compatibility (PS) -14425 + (NN) -2372 + (LL) 860
1D Compatibility (HY) -14800 + (ID) 3050
Total energy: -96148.0 ( -90.96 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_3Q8Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q8Y-query.scw
PDB file :
Tito_Scwrl_3Q8Y.pdb
: