Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFERVREDIQSVFHRDPAARNALEVLTCYPGLHAVWLHRLAHGLWTSGWKWLARLVSNFGRWMTGIEIHPGARIGRRFFIDHGMGIVIGETAEIGDDVTLYQGVTLGGTTWNKGKRHPTLGNNVVVGAGAKVLGPFTVGEGAKVGSNAVVTKEVPPGATVVGIPGRIIMREDSEQQAKRQAMAEKLGFDAYGVSQDMPDPVARAIGQLLDHLQAVDGRLEGMCQALTALGSDYCAKDLPVLREEDFAGVKDEDGNPAA
4N6B Chain:B ((95-255))
-------DLRAARERDPACVSYSHCLLNYKGFLACQAHRVAHLLWRQSRRPLALALHSRIANVFAVDIHPAARIGKGILFDHATGVVVGETAVIGNNVSILHHVTLGGT----GDRHPKIGDGVLIGAGATILGNIKIGEGAKVGAGSVVLIDVPPRTTAVGNPARLV------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4N6B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131605 for 1288 contacts (-102.2/contact) +
2D Compatibility (PS) -16806 + (NN) -8405 + (LL) 6628
1D Compatibility (HY) -11200 + (ID) 3500
Total energy: -164888.0 ( -128.02 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_4N6B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4N6B-query.scw
PDB file :
Tito_Scwrl_4N6B.pdb
: